Articles with public access mandates - Jim Leebens-MackLearn more
Available somewhere: 89
The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)
GA Tuskan, S Difazio, S Jansson, J Bohlmann, I Grigoriev, U Hellsten, ...
science 313 (5793), 1596-1604, 2006
Mandates: Genome Canada
One thousand plant transcriptomes and the phylogenomics of green plants
Nature 574 (7780), 679-685, 2019
Mandates: US National Science Foundation, US National Institutes of Health, Natural …
The minimum information about a genome sequence (MIGS) specification
D Field, G Garrity, T Gray, N Morrison, J Selengut, P Sterk, T Tatusova, ...
Nature biotechnology 26 (5), 541-547, 2008
Mandates: US National Institutes of Health
Phylotranscriptomic analysis of the origin and early diversification of land plants
NJ Wickett, S Mirarab, N Nguyen, T Warnow, E Carpenter, N Matasci, ...
Proceedings of the National Academy of Sciences 111 (45), E4859-E4868, 2014
Mandates: US National Institutes of Health
Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project
CF Taylor, D Field, SA Sansone, J Aerts, R Apweiler, M Ashburner, ...
Nature biotechnology 26 (8), 889-896, 2008
Mandates: US National Institutes of Health
Data access for the 1,000 Plants (1KP) project
N Matasci, LH Hung, Z Yan, EJ Carpenter, NJ Wickett, S Mirarab, ...
Gigascience 3 (1), 2047-217X-3-17, 2014
Mandates: US National Institutes of Health
The pineapple genome and the evolution of CAM photosynthesis
R Ming, R VanBuren, CM Wai, H Tang, MC Schatz, JE Bowers, E Lyons, ...
Nature genetics 47 (12), 1435-1442, 2015
Mandates: US Department of Energy, US National Institutes of Health
A universal probe set for targeted sequencing of 353 nuclear genes from any flowering plant designed using k-medoids clustering
MG Johnson, L Pokorny, S Dodsworth, LR Botigué, RS Cowan, A Devault, ...
Systematic biology 68 (4), 594-606, 2019
Mandates: US National Science Foundation
A genome triplication associated with early diversification of the core eudicots
Y Jiao, J Leebens-Mack, S Ayyampalayam, JE Bowers, MR McKain, ...
Genome biology 13, 1-14, 2012
Mandates: US National Institutes of Health
The asparagus genome sheds light on the origin and evolution of a young Y chromosome
A Harkess, J Zhou, C Xu, JE Bowers, R Van der Hulst, S Ayyampalayam, ...
Nature communications 8 (1), 1279, 2017
Mandates: US National Science Foundation, National Natural Science Foundation of China
Evaluating methods for isolating total RNA and predicting the success of sequencing phylogenetically diverse plant transcriptomes
MTJ Johnson, EJ Carpenter, Z Tian, R Bruskiewich, JN Burris, ...
PloS one 7 (11), e50226, 2012
Mandates: US National Institutes of Health
Genome sequences of two diploid wild relatives of cultivated sweetpotato reveal targets for genetic improvement
S Wu, KH Lau, Q Cao, JP Hamilton, H Sun, C Zhou, L Eserman, ...
Nature communications 9 (1), 4580, 2018
Mandates: US National Science Foundation, Bill & Melinda Gates Foundation, National …
The earth BioGenome project 2020: Starting the clock
HA Lewin, S Richards, E Lieberman Aiden, ML Allende, JM Archibald, ...
Proceedings of the National Academy of Sciences 119 (4), e2115635118, 2022
Mandates: US National Institutes of Health, European Molecular Biology Laboratory, UK …
Multiple polyploidy events in the early radiation of nodulating and nonnodulating legumes
SB Cannon, MR McKain, A Harkess, MN Nelson, S Dash, MK Deyholos, ...
Molecular biology and evolution 32 (1), 193-210, 2015
Mandates: US National Institutes of Health
Monocot plastid phylogenomics, timeline, net rates of species diversification, the power of multi‐gene analyses, and a functional model for the origin of monocots
TJ Givnish, A Zuluaga, D Spalink, M Soto Gomez, VKY Lam, JM Saarela, ...
American Journal of Botany 105 (11), 1888-1910, 2018
Mandates: US National Science Foundation, Natural Sciences and Engineering Research …
Plastid genomes reveal support for deep phylogenetic relationships and extensive rate variation among palms and other commelinid monocots
CF Barrett, WJ Baker, JR Comer, JG Conran, SC Lahmeyer, ...
New Phytologist 209 (2), 855-870, 2016
Mandates: US National Science Foundation
Conservation and divergence in the AGAMOUS subfamily of MADS‐box genes: evidence of independent sub‐ and neofunctionalization events
LM Zahn, JH Leebens‐Mack, JM Arrington, Y Hu, LL Landherr, ...
Evolution & development 8 (1), 30-45, 2006
Mandates: German Research Foundation
The Kalanchoë genome provides insights into convergent evolution and building blocks of crassulacean acid metabolism
X Yang, R Hu, H Yin, J Jenkins, S Shu, H Tang, D Liu, DA Weighill, ...
Nature communications 8 (1), 1899, 2017
Mandates: US Department of Energy, UK Biotechnology and Biological Sciences Research …
Evolution of chloroplast retrograde signaling facilitates green plant adaptation to land
C Zhao, Y Wang, KX Chan, DB Marchant, PJ Franks, D Randall, EE Tee, ...
Proceedings of the National Academy of Sciences 116 (11), 5015-5020, 2019
Mandates: Australian Research Council, National Natural Science Foundation of China …
A phylogenomic assessment of ancient polyploidy and genome evolution across the Poales
MR McKain, H Tang, JR McNeal, S Ayyampalayam, JI Davis, ...
Genome biology and evolution 8 (4), 1150-1164, 2016
Mandates: US National Science Foundation
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